KOKO\Mimi a3502c9b97 docs: organize project guidance and module contracts

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..

adapters

modify documents

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__init__.py

modify harness framework

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AGENTS.md

docs: organize project guidance and module contracts

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config.py

update agent, skill and scripts

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discovery.py

update agent, skill and scripts

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models.py

chore: merge dev into eigen execution prep

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process.py

chore(mitc4-shell-feast-eigen-execution-prep): WIP blocked partial deadline preparation

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toolchain.py

modify harness framework

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